INitial commit of CAC code

docs/Commands/thermo_style.md

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+# thermo_style
+
+```sh
+thermo_style args
+```
+
+## Inputs
+
+`args` - List of thermo_style options. Acceptable options are listed below:
+
+## Examples
+
+```
+thermo 50
+```
+
+## Descriptions
+
+The `thermo_style` command sets the thermo output for CAC. 
+By default the thermostyle command only outputs the potential energy and the global force norm.
+Acceptable options for thermo_style are listed below:
+
+- `pe`: potential energy
+- `fnorm`: global force norm
+- `temp`: temperature
+- `temp_c`: temperature in CG 
+- `temp_a`: temperature in atoms
+- `ke`: kinetic energy
+- `ke_c`: kinetic energy in CG 
+- `ke_a`: kinetic energy in atoms
+- `lx`, `ly`, `lz`: Box dimensions in x, y, z respectively
+- `px`, `py`, `pz`: Box pressure in x, y, z respectively